STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r3fProtein phosphatase 1 regulatory subunit 3F. (846 aa)    
Predicted Functional Partners:
gys2
Glycogen synthase 2.
   
 0.929
LOC114642649
Glycogen [starch] synthase, muscle-like.
   
 0.929
phkg1
Phosphorylase kinase catalytic subunit gamma 1.
     
 0.845
phkg2
Phosphorylase kinase catalytic subunit gamma 2.
     
 0.845
phka1
Phosphorylase kinase regulatory subunit alpha 1.
   
 
  0.845
phka2
Phosphorylase kinase regulatory subunit alpha 2.
   
 
  0.842
phkb
Phosphorylase kinase regulatory subunit beta.
   
 
  0.842
LOC114652730
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
    
 0.751
ppp1cb
Protein phosphatase 1 catalytic subunit beta.
    
 0.751
ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
    
 0.751
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.