STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oclnOccludin. (524 aa)    
Predicted Functional Partners:
tjp1
Tight junction protein 1.
    
 0.937
LOC114646713
Claudin-1-like.
    
 0.935
cldn5
Claudin 5.
    
 0.930
tjp3
Tight junction protein 3.
    
 0.893
src
SRC proto-oncogene, non-receptor tyrosine kinase.
    
 0.873
ppp2r2c
Protein phosphatase 2 regulatory subunit Bgamma.
    
  0.870
ppp2r2d
Protein phosphatase 2 regulatory subunit Bdelta.
    
  0.870
LOC114650820
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
  0.866
ppp2r2b
Protein phosphatase 2 regulatory subunit Bbeta.
    
  0.866
ppp2cb
Protein phosphatase 2 catalytic subunit beta.
    
  0.865
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.