STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114669276Protein HIRA. (1023 aa)    
Predicted Functional Partners:
LOC114659219
Histone chaperone ASF1A-like.
    
 0.982
asf1b
Anti-silencing function 1B histone chaperone.
    
 0.982
ubn1
Ubinuclein 1.
    
 0.973
cabin1
Calcineurin binding protein 1.
    
 0.971
pgbd5
piggyBac transposable element derived 5.
    
 0.758
ENSECRP00000003566
annotation not available
    
 0.758
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
    
 0.758
rdh10
Retinol dehydrogenase 10.
    
 0.758
ENSECRP00000008157
annotation not available
    
 0.758
dhrs3
Dehydrogenase/reductase 3.
    
 0.758
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.