STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcm3apMinichromosome maintenance complex component 3 associated protein. (2093 aa)    
Predicted Functional Partners:
cetn3
Centrin 3.
    
 0.999
eny2
ENY2 transcription and export complex 2 subunit.
    
 0.999
pcid2
PCI domain containing 2.
   
 0.997
ENSECRP00000019083
annotation not available
    
 0.996
nup153
Nucleoporin 153.
    
 0.987
nxf1
Nuclear RNA export factor 1.
    
 
 0.978
nup98
Nucleoporin 98.
   
0.976
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
    
 0.948
LOC114656261
ATP-dependent RNA helicase DDX19B-like.
   
 0.933
LOC114651930
Caltractin.
    
 0.929
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.