STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114669075Transmembrane protein 132D-like. (1085 aa)    
Predicted Functional Partners:
glt1d1
Glycosyltransferase 1 domain containing 1.
      
 0.561
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
   
 
  0.561
fam20b
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.481
zc3h18
Zinc finger CCCH-type containing 18.
      
 0.461
samd7
Sterile alpha motif domain containing 7.
   
 
  0.448
ccdc92
Coiled-coil domain containing 92.
      
 0.428
pebp1
Phosphatidylethanolamine binding protein 1.
      
 0.400
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.