STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fchsd1FCH and double SH3 domains 1. (721 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
   
0.939
itsn1
Intersectin 1.
   
0.854
gas7
Growth arrest specific 7.
    
 0.706
ENSECRP00000002444
annotation not available
   
 0.705
was
WASP actin nucleation promoting factor.
   
 0.705
ENSECRP00000032407
annotation not available
   
 0.705
tsen2
tRNA splicing endonuclease subunit 2.
    
   0.693
pdzd7
PDZ domain containing 7.
    
   0.681
LOC114651623
Shootin-1-like.
   
 0.660
LOC114660137
Shootin-1-like.
   
 0.660
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.