STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dstykDual serine/threonine and tyrosine protein kinase. (912 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
 0.827
mib2
Mindbomb E3 ubiquitin protein ligase 2.
  
 0.814
cd247
CD247 molecule.
   
 0.763
LOC114647339
Ubiquitin-conjugating enzyme E2 variant 3-like.
   
 0.743
itsn2
Intersectin 2.
   
 0.694
map2k4
Mitogen-activated protein kinase kinase 4.
    
0.675
traf7
TNF receptor associated factor 7.
    
 0.673
tradd
TNFRSF1A associated via death domain.
    
 0.666
fas
Fas cell surface death receptor.
    
 0.660
ube2v1
Ubiquitin conjugating enzyme E2 V1.
    
 0.658
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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