STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx5T-box transcription factor 5. (518 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 
 0.916
yap1
Yes associated protein 1.
    
 0.739
wwtr1
WW domain containing transcription regulator 1.
    
 0.725
gata4
GATA binding protein 4.
   
 0.710
hand2
Heart and neural crest derivatives expressed 2.
   
 0.650
ctnnb1
Catenin beta 1.
    
 0.553
gata6
GATA binding protein 6.
   
 0.549
gata5
GATA binding protein 5.
   
 0.547
nppa
Natriuretic peptide A.
     
 0.544
yaf2
YY1 associated factor 2.
    
  0.526
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.