STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pclafPCNA clamp associated factor. (113 aa)    
Predicted Functional Partners:
LOC114648872
Proliferating cell nuclear antigen.
   
  0.969
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 
 0.846
fancm
FA complementation group M.
    
   0.829
birc5
Baculoviral IAP repeat containing 5.
   
  
 0.816
dlgap5
DLG associated protein 5.
   
  
 0.810
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
  
 0.805
kif11
Kinesin family member 11.
   
  
 0.795
ENSECRP00000018514
annotation not available
   
  
 0.780
aspm
Abnormal spindle microtubule assembly.
   
  
 0.778
cenpf
Centromere protein F.
   
  
 0.765
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.