STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659163Transcription factor BTF3 homolog 4. (158 aa)    
Predicted Functional Partners:
naca
Nascent polypeptide associated complex subunit alpha.
   
 0.997
LOC114663573
Uncharacterized LOC114663573.
   
 0.994
rpl8
Ribosomal protein L8.
   
  0.982
rpl6
Ribosomal protein L6.
   
 0.982
rpl31
Ribosomal protein L31.
   
 0.981
rpl30
Ribosomal protein L30.
   
  0.976
rpl19
Ribosomal protein L19.
   
  0.974
rpl32
Ribosomal protein L32.
   
  0.973
rpl23a
Ribosomal protein L23a.
   
 0.967
rpl18a
Ribosomal protein L18a.
   
  0.964
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.