STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000029264annotation not available (147 aa)    
Predicted Functional Partners:
LOC114659216
Uricase-like.
  
 
 0.910
gda
Guanine deaminase.
 
 
 0.909
acsf3
acyl-CoA synthetase family member 3.
    
 0.862
LOC114658599
Purine nucleoside phosphorylase-like.
   
 
 0.861
LOC114645718
Purine nucleoside phosphorylase-like.
   
 
 0.859
LOC114657727
Purine nucleoside phosphorylase-like.
   
 
 0.859
LOC114663855
Purine nucleoside phosphorylase-like.
   
 
 0.859
echdc1
ethylmalonyl-CoA decarboxylase 1.
     
 0.852
upb1
Beta-ureidopropionase 1.
   
 
 0.852
acox1
acyl-CoA oxidase 1.
     
 0.850
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.