STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc8b1Solute carrier family 8 member B1. (572 aa)    
Predicted Functional Partners:
oca2
OCA2 melanosomal transmembrane protein.
  
  
 0.604
get4
Guided entry of tail-anchored proteins factor 4.
    
   0.603
ENSECRP00000000890
annotation not available
    
   0.547
pygo2
Pygopus family PHD finger 2.
    
   0.547
LOC114652394
Calcium-binding protein P-like.
    
   0.547
pnisr
PNN interacting serine and arginine rich protein.
    
   0.547
skida1
SKI/DACH domain containing 1.
    
   0.547
dazap2
DAZ associated protein 2.
    
   0.547
LOC114654777
Probable global transcription activator SNF2L2.
    
   0.547
nhsl1
NHS like 1.
    
   0.547
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.