STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiad1UbiA prenyltransferase domain containing 1. (354 aa)    
Predicted Functional Partners:
hmgcr
3-hydroxy-3-methylglutaryl-CoA reductase.
   
 
 0.946
coq2
Coenzyme Q2, polyprenyltransferase.
    
 0.939
LOC114649540
Procollagen C-endopeptidase enhancer 2-like.
    
 0.931
acot13
acyl-CoA thioesterase 13.
    
 0.931
LOC114653675
Isopentenyl-diphosphate Delta-isomerase 1-like.
    
 0.885
pdss2
Decaprenyl diphosphate synthase subunit 2.
    
 0.874
pdss1
Decaprenyl diphosphate synthase subunit 1.
    
 0.874
hao2
Hydroxyacid oxidase 2.
    
 0.872
hao1
Hydroxyacid oxidase 1.
    
 0.872
nqo1
NAD(P)H quinone dehydrogenase 1.
    
  0.871
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.