STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjcYdjC chitooligosaccharide deacetylase homolog. (326 aa)    
Predicted Functional Partners:
kl
Klotho.
  
 
 0.722
LOC114651793
Cytosolic beta-glucosidase-like.
  
 
 0.722
klb
Klotho beta.
  
 
 0.722
lrrc14
Leucine rich repeat containing 14.
  
 
 0.722
lctl
Lactase like.
  
 
 0.722
lct
Lactase.
  
 
 0.722
cdc16
Cell division cycle 16.
    
 
 0.447
has3
Hyaluronan synthase 3.
     
 0.437
LOC114667377
Hyaluronan synthase 1-like.
     
 0.437
has2
Hyaluronan synthase 2.
     
 0.437
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.