STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
akap13A-kinase anchoring protein 13. (2903 aa)    
Predicted Functional Partners:
rhob
Ras homolog family member B.
   
 0.806
ENSECRP00000002180
annotation not available
   
 0.806
LOC114648818
Rho-related GTP-binding protein RhoA-D.
   
 0.806
LOC114660750
Rho-related GTP-binding protein RhoA-A.
   
 0.806
rhoa
Ras homolog family member A.
   
 0.806
rnd3
Rho family GTPase 3.
   
 0.761
rnd1
Rho family GTPase 1.
   
 0.761
gna12
G protein subunit alpha 12.
    
 0.761
gna13
G protein subunit alpha 13.
    
 0.761
LOC114646056
Cingulin-like.
     
 0.756
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.