STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snupnSnurportin 1. (389 aa)    
Predicted Functional Partners:
kpnb1
Karyopherin subunit beta 1.
    
 0.996
xpo5
Exportin 5.
    
 0.977
xpo1
Exportin 1.
    
 0.975
LOC114644471
Exportin-1.
    
 0.975
nup214
Nucleoporin 214.
    
 0.948
LOC114659684
GTP-binding nuclear protein Ran.
    
 0.944
ran
RAN, member RAS oncogene family.
    
 0.944
ENSECRP00000029575
annotation not available
    
 0.944
dnttip1
Deoxynucleotidyltransferase terminal interacting protein 1.
     
 0.905
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.880
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.