STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000030068annotation not available (137 aa)    
Predicted Functional Partners:
tmem231
Transmembrane protein 231.
   
 
 0.884
mks1
MKS transition zone complex subunit 1.
     
 0.875
b9d1
B9 domain containing 1.
     
 0.874
b9d2
B9 domain containing 2.
     
 0.871
tmem107
Transmembrane protein 107.
     
 0.831
LOC114652769
Coiled-coil and C2 domain-containing protein 2A-like.
   
 
 0.821
cc2d2a
Coiled-coil and C2 domain containing 2A.
   
 
 0.821
tmem216
Transmembrane protein 216.
   
 
 0.817
LOC114643396
Transmembrane protein 80-like.
   
 
 0.817
ENSECRP00000014802
annotation not available
     
 0.814
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.