STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbpMyelin basic protein. (300 aa)    
Predicted Functional Partners:
LOC114662531
Proteolipid protein DM alpha-like.
   
 
 0.831
mapk7
Mitogen-activated protein kinase 7.
   
 
 0.698
mapk1
Mitogen-activated protein kinase 1.
   
 
 0.698
LOC114661713
Mitogen-activated protein kinase 1-like.
   
 
 0.698
calml6
Calmodulin like 6.
    
 
 0.653
gpm6a
Glycoprotein M6A.
   
 
 0.639
pvalb
Parvalbumin.
    
 
 0.634
cnp
2',3'-cyclic nucleotide 3' phosphodiesterase.
   
  
 0.626
egr2
Early growth response 2.
     
 0.622
ctdspl
CTD small phosphatase like.
    
 
 0.585
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.