STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114666458Cholesterol 24-hydroxylase-like. (747 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
    
 0.853
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.850
ENSECRP00000019819
annotation not available
    
 0.839
ENSECRP00000000413
annotation not available
  
 0.833
LOC114654182
Cholesterol 25-hydroxylase-like protein 2.
  
 0.833
lss
Lanosterol synthase.
   
 0.829
ch25h
Cholesterol 25-hydroxylase.
  
 0.823
ENSECRP00000007288
annotation not available
  
 0.823
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.823
dhcr7
7-dehydrocholesterol reductase.
   
 0.820
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.