STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000030443annotation not available (60 aa)    
Predicted Functional Partners:
abitram
Actin binding transcription modulator.
    
   0.793
nop10
NOP10 ribonucleoprotein.
     
 0.520
pus7
Pseudouridine synthase 7.
   
  
 0.502
pus7l
Pseudouridine synthase 7 like.
   
  
 0.471
pus1
Pseudouridine synthase 1.
   
  
 0.434
LOC114655670
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like.
      
 0.428
dkc1
Dyskerin pseudouridine synthase 1.
   
  
 0.419
pus3
Pseudouridine synthase 3.
   
  
 0.419
thumpd2
THUMP domain containing 2.
     
 0.418
trub2
TruB pseudouridine synthase family member 2.
   
  
 0.409
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.