STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tex9Testis expressed 9. (398 aa)    
Predicted Functional Partners:
ccdc112
Coiled-coil domain containing 112.
    
 
 0.713
nol4
Nucleolar protein 4.
    
   0.540
nol4l
Nucleolar protein 4 like.
    
   0.540
ENSECRP00000012253
annotation not available
    
 
 0.455
c2h10orf88
Chromosome 2 C10orf88 homolog.
      
 0.455
utp3
UTP3 small subunit processome component.
      
 0.449
LOC114644110
Motile sperm domain-containing protein 2-like.
      
 0.440
faxc
Failed axon connections homolog, metaxin like GST domain containing.
      
 0.432
ENSECRP00000010959
annotation not available
   
   0.419
adgrl4
Adhesion G protein-coupled receptor L4.
      
 0.410
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.