STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114668727Transmembrane protein 248-like. (374 aa)    
Predicted Functional Partners:
map2k3
Mitogen-activated protein kinase kinase 3.
    
 0.712
LOC114664925
Dual specificity mitogen-activated protein kinase kinase 6.
    
 0.712
bub3
BUB3 mitotic checkpoint protein.
     
 0.487
brk1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 
  0.481
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
 
  0.453
igfbp5
Insulin like growth factor binding protein 5.
    
 0.445
wwtr1
WW domain containing transcription regulator 1.
    
 
 0.430
yap1
Yes associated protein 1.
    
 
 0.430
igfbp3
Insulin like growth factor binding protein 3.
    
 0.422
igfbp1
Insulin like growth factor binding protein 1.
    
 0.422
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.