STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000030629annotation not available (113 aa)    
Predicted Functional Partners:
ube2v1
Ubiquitin conjugating enzyme E2 V1.
    
 0.985
pink1
PTEN induced kinase 1.
    
 0.980
LOC114662601
Polyubiquitin-like.
    
 0.965
rps27a
Ribosomal protein S27a.
    
 0.965
mfn2
Mitofusin 2.
    
 0.961
mfn1
Mitofusin 1.
    
 0.960
ube2l3
Ubiquitin conjugating enzyme E2 L3.
    
 0.941
ENSECRP00000022279
annotation not available
    
 0.930
rhot1
Ras homolog family member T1.
    
 0.930
sncaip
Synuclein alpha interacting protein.
    
 0.929
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.