STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114662735Kelch-like ECH-associated protein 1. (604 aa)    
Predicted Functional Partners:
cul3
Cullin 3.
    
 0.928
sqstm1
Sequestosome 1.
    
 0.916
rbx1
Ring-box 1.
    
 0.864
ENSECRP00000011821
annotation not available
    
 0.843
nfe2l3
Nuclear factor, erythroid 2 like 3.
    
 0.829
nfe2l1
Nuclear factor, erythroid 2 like 1.
    
 0.829
klhl21
Kelch like family member 21.
  
 
 
0.770
kbtbd8
Kelch repeat and BTB domain containing 8.
  
 
0.766
bbs1
Bardet-Biedl syndrome 1.
    
 0.763
klhl7
Kelch like family member 7.
  
 
 
0.763
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.