STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nuf2NUF2 component of NDC80 kinetochore complex. (455 aa)    
Predicted Functional Partners:
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.998
ENSECRP00000021383
annotation not available
   
 0.998
LOC114669453
Kinetochore protein Spc25-like.
   
 0.998
LOC114657089
Kinetochore protein NDC80 homolog.
   
 0.998
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.997
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.992
ttk
TTK protein kinase.
   
 
 0.987
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 0.987
dsn1
DSN1 component of MIS12 kinetochore complex.
   
 0.971
kif11
Kinesin family member 11.
   
 
 0.967
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.