STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miga2Mitoguardin 2. (592 aa)    
Predicted Functional Partners:
miga1
Mitoguardin 1.
    
 
0.749
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.731
nexn
Nexilin F-actin binding protein.
 
   
 0.686
LOC114662176
Magnesium transporter protein 1-like.
   
 
  0.654
LOC114652065
Tumor suppressor candidate 3.
   
 
  0.654
surf6
Surfeit 6.
     
 0.643
vapa
VAMP associated protein A.
    
 
 0.482
vapb
VAMP associated protein B and C.
    
 
 0.482
pld6
Phospholipase D family member 6.
    
 
 0.470
foxred1
FAD dependent oxidoreductase domain containing 1.
   
  
 0.456
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.