STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000030779annotation not available (112 aa)    
Predicted Functional Partners:
LOC114650950
E3 SUMO-protein ligase RanBP2-like.
   
 
  0.534
atg16l1
Autophagy related 16 like 1.
    
 0.521
rps27a
Ribosomal protein S27a.
    
  0.520
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.516
ripk4
Receptor interacting serine/threonine kinase 4.
    
  0.505
LOC114648612
Interleukin-1 beta-like.
    
  0.457
rfxap
Regulatory factor X associated protein.
     
 0.432
serpind1
Serpin family D member 1.
      
 0.428
dpp9
Dipeptidyl peptidase 9.
    
   0.403
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.