STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000030790annotation not available (466 aa)    
Predicted Functional Partners:
acbd5
acyl-CoA binding domain containing 5.
   
    0.566
acbd4
acyl-CoA binding domain containing 4.
   
    0.566
LOC114652260
acyl-CoA-binding domain-containing protein 4-like.
   
    0.422
eci2
enoyl-CoA delta isomerase 2.
   
    0.422
acbd6
acyl-CoA binding domain containing 6.
   
    0.422
dbi
Diazepam binding inhibitor, acyl-CoA binding protein.
   
    0.422
acbd7
acyl-CoA binding domain containing 7.
   
    0.422
LOC114666476
Protein GLUTELIN PRECURSOR ACCUMULATION 3-like.
   
    0.422
efcab11
EF-hand calcium binding domain 11.
      
 0.420
polr2k
RNA polymerase II subunit K.
      
 0.407
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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