STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndel1nudE neurodevelopment protein 1 like 1. (343 aa)    
Predicted Functional Partners:
pafah1b1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.957
ENSECRP00000006522
annotation not available
     
 0.934
tbc1d31
TBC1 domain family member 31.
    
 0.908
kif17
Kinesin family member 17.
     
 0.818
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon.
    
 0.802
nudc
Nuclear distribution C, dynein complex regulator.
     
 0.800
LOC114649345
Kinesin-like protein KIF13B.
    
 0.791
kif13a
Kinesin family member 13A.
    
 0.791
kif18a
Kinesin family member 18A.
   
 
 0.789
kif22
Kinesin family member 22.
     
 0.788
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.