STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekha8Pleckstrin homology domain containing A8. (547 aa)    
Predicted Functional Partners:
arl6
ADP ribosylation factor like GTPase 6.
   
 0.606
LOC114662062
ADP-ribosylation factor 4-like.
   
 0.606
LOC114665449
ADP-ribosylation factor 1.
   
 0.606
LOC114662441
ADP-ribosylation factor-like protein 6.
   
 0.606
arf3
ADP ribosylation factor 3.
   
 0.606
arf4
ADP ribosylation factor 4.
   
 0.606
LOC114653165
ADP-ribosylation factor-like protein 5B.
   
 0.523
arl5c
ADP ribosylation factor like GTPase 5C.
   
 0.523
arl5a
ADP ribosylation factor like GTPase 5A.
   
 0.523
LOC114659330
ADP-ribosylation factor 1-like.
   
 0.501
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.