STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114669138Clathrin heavy chain 1-like. (1628 aa)    
Predicted Functional Partners:
ENSECRP00000001571
annotation not available
   
 0.999
gak
Cyclin G associated kinase.
   
 0.999
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.997
itsn2
Intersectin 2.
    
 0.994
itsn1
Intersectin 1.
    
 0.993
clta
Clathrin light chain A.
   
 0.977
ENSECRP00000028697
annotation not available
   
 0.977
ap2b1
Adaptor related protein complex 2 subunit beta 1.
   
 0.962
ap4b1
Adaptor related protein complex 4 subunit beta 1.
   
 0.952
LOC114660664
AP-2 complex subunit alpha-2-like.
   
 0.945
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.