STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000031407annotation not available (183 aa)    
Predicted Functional Partners:
pafah1b1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.968
LOC114660069
Phospholipase A2-like.
     
 0.833
lpcat1
Lysophosphatidylcholine acyltransferase 1.
     
 0.832
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.832
pla2g12b
Phospholipase A2 group XIIB.
     
 0.824
pafah1b2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
  
  
 
0.822
LOC114668559
Phospholipase A2-like.
     
 0.816
tbc1d31
TBC1 domain family member 31.
    
 0.729
ENSECRP00000029171
annotation not available
     
 0.724
pla2g7
Phospholipase A2 group VII.
     
 0.701
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.