STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chek2Checkpoint kinase 2. (505 aa)    
Predicted Functional Partners:
LOC114643508
Serine/threonine-protein kinase ATR-like.
    
 0.996
tp53bp1
Tumor protein p53 binding protein 1.
    
 0.995
chek1
Checkpoint kinase 1.
   
0.994
atm
ATM serine/threonine kinase.
    
 0.986
tp53
Tumor protein p53.
    
 0.984
LOC114660460
PWWP domain-containing protein 2A-like.
    
 0.978
cdc7
Cell division cycle 7.
    
 
 0.976
brca1
BRCA1 DNA repair associated.
   
 0.966
cdc25b
Cell division cycle 25B.
   
 0.965
plk2
Polo like kinase 2.
   
0.965
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.