STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000031681annotation not available (744 aa)    
Predicted Functional Partners:
pycard
PYD and CARD domain containing.
   
 0.703
rfx5
Regulatory factor X5.
    
 0.583
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.583
brcc3
BRCA1/BRCA2-containing complex subunit 3.
    
  0.577
nek7
NIMA related kinase 7.
    
 0.574
nek6
NIMA related kinase 6.
    
 0.574
LOC114648612
Interleukin-1 beta-like.
   
 0.568
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.552
LOC114657796
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 0.552
LOC114655884
Caspase-1-like.
   
 0.545
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.