STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jade1Jade family PHD finger 1. (858 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1 associated factor 6.
    
 0.881
ing4
Inhibitor of growth family member 4.
    
 0.782
ing5
Inhibitor of growth family member 5.
    
 0.750
kat5
Lysine acetyltransferase 5.
    
 0.633
kat8
Lysine acetyltransferase 8.
    
 0.633
kat7
Lysine acetyltransferase 7.
    
 0.633
kat6b
Lysine acetyltransferase 6B.
    
 0.633
ing3
Inhibitor of growth family member 3.
    
 0.581
ENSECRP00000000282
annotation not available
    
 0.576
ing2
Inhibitor of growth family member 2.
    
 0.567
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.