STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114667788Epoxide hydrolase 4-like. (363 aa)    
Predicted Functional Partners:
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.736
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.719
oxct1
3-oxoacid CoA-transferase 1.
  
 
 0.660
adsl
Adenylosuccinate lyase.
    
 0.652
acox3
acyl-CoA oxidase 3, pristanoyl.
  
 0.649
acadm
acyl-CoA dehydrogenase medium chain.
  
 0.647
acadsb
acyl-CoA dehydrogenase short/branched chain.
  
 0.647
ENSECRP00000014326
annotation not available
  
 0.647
acadvl
acyl-CoA dehydrogenase very long chain.
  
 0.647
LOC114663381
Probable acyl-CoA dehydrogenase 6.
  
 0.647
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.