STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642613Glutamine synthetase-like. (372 aa)    
Predicted Functional Partners:
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.943
eprs1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.883
gfpt2
Glutamine-fructose-6-phosphate transaminase 2.
  
 
 0.792
ctps1
CTP synthase 1.
  
 0.780
glud1
Glutamate dehydrogenase 1.
  
 
 0.777
gmps
Guanine monophosphate synthase.
    
 0.772
ttc5
Tetratricopeptide repeat domain 5.
  
 0.770
fdxr
Ferredoxin reductase.
  
 
 0.755
fads6
Fatty acid desaturase 6.
  
 
 0.755
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 
 0.752
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.