STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl7Oxysterol binding protein like 7. (890 aa)    
Predicted Functional Partners:
vapa
VAMP associated protein A.
    
 0.802
vapb
VAMP associated protein B and C.
    
 0.802
LOC114648867
Motile sperm domain-containing protein 1-like.
    
 0.728
mospd1
Motile sperm domain containing 1.
    
 0.728
ENSECRP00000001571
annotation not available
   
 
 0.590
gak
Cyclin G associated kinase.
   
 
 0.590
gse1
Gse1 coiled-coil protein.
    
  0.489
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.438
spata5
Spermatogenesis associated 5.
   
  0.401
vcp
Valosin containing protein.
   
  0.401
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.