STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000032227annotation not available (326 aa)    
Predicted Functional Partners:
mtrex
Mtr4 exosome RNA helicase.
   
 0.757
tent4a
Terminal nucleotidyltransferase 4A.
   
 0.595
tent4b
Terminal nucleotidyltransferase 4B.
   
 0.595
skiv2l
Ski2 like RNA helicase.
   
 0.520
ipo8
Importin 8.
   
 0.503
ipo7
Importin 7.
   
 0.503
mrpl16
Mitochondrial ribosomal protein L16.
   
  0.472
brix1
Biogenesis of ribosomes BRX1.
   
   0.412
ebna1bp2
EBNA1 binding protein 2.
   
   0.407
eif2a
Eukaryotic translation initiation factor 2A.
    
  0.405
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.