STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspb8Heat shock protein family B (small) member 8. (191 aa)    
Predicted Functional Partners:
bag3
BCL2 associated athanogene 3.
   
 0.994
tsc1
TSC complex subunit 1.
   
 0.947
ENSECRP00000027892
annotation not available
    
 0.944
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
 0.938
dnajc9
DnaJ heat shock protein family (Hsp40) member C9.
   
  0.937
cct3
Chaperonin containing TCP1 subunit 3.
   
 0.936
LOC114647034
Serine/threonine-protein phosphatase 5.
     
 0.934
cct7
Chaperonin containing TCP1 subunit 7.
    
 0.934
cct5
Chaperonin containing TCP1 subunit 5.
    
 0.933
cct6a
Chaperonin containing TCP1 subunit 6A.
    
 0.933
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.