STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acss1acyl-CoA synthetase short chain family member 1. (688 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
  
 0.963
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.905
hadh
hydroxyacyl-CoA dehydrogenase.
  
 
 0.897
acaa2
acetyl-CoA acyltransferase 2.
  
 
 0.897
LOC114668691
Aldehyde dehydrogenase family 3 member B1-like.
  
 0.893
scp2
Sterol carrier protein 2.
  
 
 0.891
acox1
acyl-CoA oxidase 1.
  
 
 0.886
acox3
acyl-CoA oxidase 3, pristanoyl.
  
 
 0.885
acaca
acetyl-CoA carboxylase alpha.
  
 0.885
acacb
acetyl-CoA carboxylase beta.
  
 0.885
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.