STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtwd1DTW domain containing 1. (324 aa)    
Predicted Functional Partners:
med7
Mediator complex subunit 7.
     
 0.936
med6
Mediator complex subunit 6.
   
 
 0.933
med31
Mediator complex subunit 31.
     
 0.930
med18
Mediator complex subunit 18.
     
 0.819
ccdc85c
Coiled-coil domain containing 85C.
      
 0.575
dtwd2
DTW domain containing 2.
      
 0.562
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
      
 0.562
mphosph10
M-phase phosphoprotein 10.
      
 0.562
tsr3
TSR3 ribosome maturation factor.
      
 0.561
dus2
Dihydrouridine synthase 2.
      
 0.561
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.