STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilf3Interleukin enhancer binding factor 3. (973 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 
0.991
dhx9
DExH-box helicase 9.
   
 
0.904
LOC114645737
Heterogeneous nuclear ribonucleoprotein C-like.
   
 
 0.891
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.858
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.849
srrt
Serrate, RNA effector molecule.
   
  
 0.730
LOC114665731
Interferon-induced, double-stranded RNA-activated protein kinase-like.
    
 
 0.713
ENSECRP00000025718
annotation not available
    
 
 0.713
LOC114642199
Interferon-induced, double-stranded RNA-activated protein kinase-like.
    
 
 0.713
elavl1
ELAV like RNA binding protein 1.
   
 
 0.709
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.