STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000032672annotation not available (512 aa)    
Predicted Functional Partners:
LOC114656481
Acetylcholine receptor subunit alpha-like.
  
0.766
chrna1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.766
chrnb3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.742
chrna2
Cholinergic receptor nicotinic alpha 2 subunit.
  
 
 
0.737
LOC114659747
Neuronal acetylcholine receptor subunit alpha-4-like.
  
 
 
0.737
LOC114642700
Neuronal acetylcholine receptor subunit alpha-7-like.
  
0.724
LOC114654954
Neuronal acetylcholine receptor subunit alpha-7-like.
  
0.723
LOC114655176
Neuronal acetylcholine receptor subunit beta-2-like.
  
  
 
0.521
ENSECRP00000007067
annotation not available
  
  
 
0.516
jak1
Janus kinase 1.
    
  0.481
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.