STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642333Inactive phospholipase C-like protein 2. (1049 aa)    
Predicted Functional Partners:
pmch
Pro-melanin concentrating hormone.
   
 
 0.912
hcrtr2
Hypocretin receptor 2.
    
 0.874
LOC114665209
Orexin receptor type 1-like.
    
 0.776
ENSECRP00000009191
annotation not available
   
 
 0.758
myo3b
Myosin IIIB.
   
 
 0.758
LOC114654330
myosin-IIIb-like.
   
 
 0.758
ipmk
Inositol polyphosphate multikinase.
    
 0.723
inppl1
Inositol polyphosphate phosphatase like 1.
     
 0.714
LOC114662388
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like.
     
 0.714
pi4kb
Phosphatidylinositol 4-kinase beta.
     
 0.702
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.