STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000033051annotation not available (113 aa)    
Predicted Functional Partners:
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.992
snw1
SNW domain containing 1.
   
 0.992
xab2
XPA binding protein 2.
   
 0.991
cdc40
Cell division cycle 40.
   
 0.990
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.990
prpf19
pre-mRNA processing factor 19.
   
 0.990
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.990
plrg1
Pleiotropic regulator 1.
   
 0.990
cwc15
CWC15 spliceosome associated protein homolog.
   
 0.989
prpf8
pre-mRNA processing factor 8.
   
 0.989
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.