STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642356Trafficking protein particle complex subunit 5-like. (190 aa)    
Predicted Functional Partners:
trappc3
Trafficking protein particle complex 3.
   
 0.991
trappc1
Trafficking protein particle complex 1.
   
 0.990
trappc2l
Trafficking protein particle complex 2 like.
   
 0.990
trappc8
Trafficking protein particle complex 8.
    
 0.989
trappc2
Trafficking protein particle complex 2.
    
 0.989
trappc4
Trafficking protein particle complex 4.
   
 0.989
trappc10
Trafficking protein particle complex 10.
    
 0.988
trappc9
Trafficking protein particle complex 9.
    
 0.988
ENSECRP00000003928
annotation not available
    
 0.977
ENSECRP00000004868
annotation not available
   
 0.970
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.