STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdfy4WDFY family member 4. (3197 aa)    
Predicted Functional Partners:
atg5
Autophagy related 5.
    
 0.906
atg12
Autophagy related 12.
    
 0.884
rubcn
Rubicon autophagy regulator.
   
 0.860
rbsn
Rabenosyn, RAB effector.
     
 0.857
LOC114648448
EH domain-containing protein 2-like.
     
 0.856
LOC114648343
EH domain-containing protein 3.
     
 0.856
LOC114657979
EH domain-containing protein 1.
     
 0.856
ehd4
EH domain containing 4.
     
 0.856
LOC114658621
Uncharacterized LOC114658621.
     
 0.851
srl
Sarcalumenin.
     
 0.851
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.