STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufaf3NADH:ubiquinone oxidoreductase complex assembly factor 3. (176 aa)    
Predicted Functional Partners:
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 0.999
ndufaf4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
   
 0.999
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
   
 0.996
ENSECRP00000033664
annotation not available
   
 0.996
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
   
 0.995
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
 0.995
LOC114667105
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
   
 0.995
ndufa13
NADH:ubiquinone oxidoreductase subunit A13.
   
 0.995
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
   
 0.994
ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
   
 0.991
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (22%) [HD]