STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114669657Receptor-type tyrosine-protein phosphatase eta-like. (1248 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.751
ENSECRP00000022943
annotation not available
    
 0.751
ctnnd1
Catenin delta 1.
    
  0.729
ENSECRP00000002874
annotation not available
    
  0.701
ENSECRP00000012278
annotation not available
    
  0.701
tnn
Tenascin N.
    
 
0.701
tnr
Tenascin R.
    
 
0.701
tnc
Tenascin C.
    
 
0.701
ENSECRP00000027622
annotation not available
    
  0.701
ctnnb1
Catenin beta 1.
    
 0.675
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.